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Table 6 The fraction of matched complexes with a given overlap score threshold (ω ≥ 0.25) of ClusterONE on PPI datasets using the MIPS gold standard

From: Integrating PPI datasets with the PPI data from biomedical literature for protein complex detection

Threshold

Collins

Gavin

Krogan-core

Krogan-extended

BioGRID

 

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Origin

195

78

194

68

522

77

531

94

472

87

0

210

75

226

68

520

88

622

115

487

81

-0.1

208

77

226

68

522

88

619

117

488

81

-0.2

206

76

226

71

516

87

615

107

503

75

-0.3

214

78

229

72

504

80

610

110

509

75

-0.4

212

77

233

73

503

87

612

101

523

86

-0.5

211

74

241

72

499

87

613

103

554

87

-0.6

206

78

242

74

493

87

599

103

577

87

-0.7

209

81

253

77

484

88

602

102

601

89

-0.8

206

81

245

78

471

90

617

99

640

90

-0.9

206

79

242

80

470

88

608

98

679

90