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Table 8 The MMR performances of ClusterONE on PPI datasets using the SGD gold standard

From: Integrating PPI datasets with the PPI data from biomedical literature for protein complex detection

Threshold

Collins

Gavin

Krogan-core

Krogan-extended

BioGRID

Avg.Δ

Origin

0.2994

0.2483

0.2849

0.2856

0.2942

 

0

0.3035

0.2574

0.3057

0.3117

0.3040

 

-0.1

0.3033

0.2574

0.3072

0.3118

0.2987

 

-0.2

0.3034

0.2584

0.3099

0.3202

0.2911

 

-0.3

0.3068

0.26

0.312

0.3195

0.2836

 

-0.4

0.3042

0.2665

0.3147

0.3189

0.2900

 

-0.5

0.2931

0.2632

0.3107

0.3176

0.2977

 

-0.6

0.2879

0.2633

0.3159

0.3211

0.2977

 

-0.7

0.2953

0.2648

0.3123

0.3214

0.2847

 

-0.8

0.297

0.264

0.3082

0.3139

0.2802

 

-0.9

0.2955

0.2622

0.3071

0.3162

0.2782

 

Δ(-0.6)

-3.84%

6.4%

10.9%

12.43%

1.19%

5.416%