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Table 2 Assembly result of next-generation sequencing data for Staphylococcus aureus and Rhodobacter sphaeroides

From: SeedsGraph: an efficient assembler for next-generation sequencing data

Dataset

Staphylococcus aureus

Rhodobacter sphaeroides

 

SGA [8]

SeedsGraph

SGA [8]

SeedsGraph

Number of contigs

274

754

3,067

7,033

N50 of contigs (kb)

24

43

27

42

Number of scaffolds

122

323

2096

4291

N50 of scaffolds (kb)

205

174

95

46

Assembly size (%)

94.2

87.4

97.2

86.3

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BMC Medical Genomics

ISSN: 1755-8794

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