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Figure 1 | BMC Medical Genomics

Figure 1

From: PDEGEM: Modeling non-uniform read distribution in RNA-Seq data

Figure 1

The stacking energy of PDEGEM in 8 different samples of Dataset 1. The x-axis represents the 16 dinucleotides AA, AC, ..., and TT , while the y-axis indicates the stacking energies of the dinucleotides. Lines with different colors indicate different datasets. w1, w2 and w3 represent Wold data, b1, b2 and b3 stand for Burge Data, while g1 and g2 indicate Grimmond data.

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