PDEGEM: Modeling non-uniform read distribution in RNA-Seq data

BMC Medical Genomics

Table 6 Pearson's correlation coefficients of %ASex.

	Tissue	AS events	PCC¹ by uniform model	PCC by MART	PDEGEM
1	Brain	699	0.36	0.40	0.41
	Liver	472	0.48	0.50	0.53
	Muscle	451	0.40	0.45	0.47
2	Brain	298	0.44	0.50	0.52
	Liver	228	0.60	0.60	0.62
	Muscle	194	0.48	0.51	0.52

The Pearson's correlation coefficients(PCC) of uniform model, MART, PDEGEM with the isoform expression measured by microarray in Dataset 4.
¹Pearson's correlation coeficient

ISSN: 1755-8794