Table 1 Datasets analyzed.
From: Konnector v2.0: pseudo-long reads from paired-end sequencing data
Organism | Genome Size | NGS data source | Read length (bp) | Read pairs (M) | Fragment size (bp) | Fold coverage |
|---|---|---|---|---|---|---|
E.coli K-12 | 5 Mbp | Simulated | PE100 | 1.2 | 400 | 50X |
S. cerevisiae | 12 Mbp | Experimental SRA:ERR156523 | PE100 | 1.6 | 300 | 26X |
C.elegans | 97 Mbp | Experimental SRA:ERR294494 | PE100 | 44.7 | 450 | 89X |
H.sapiens NA19238 | 3 Gbp | Experimental SRA:ERR309932 | PE250 | 457.0 | 550 | 76X |