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Figure 2 | BMC Medical Genomics

Figure 2

From: Hybrid de novo tandem repeat detection using short and long reads

Figure 2

The de Bruijn graph of an ETR with p = ATTGCG and cnp = 3 in two cases: |p|>k ( k = 4, left) and |p|≤k ( k = 8, right). The vertices v 1 and ve are the ones described in Property 1. The arcs frequencies in the de Bruijn graph are given by the (k+1)-mer occurrences number in the ETR (between brackets in b)). For sake of simplicity we choose for the coverage depth δ = 1.

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