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Table 7 List of the five genes most over- or under-expressed (all significantly, with q <0.05)

From: Integrated differential transcriptome maps of Acute Megakaryoblastic Leukemia (AMKL) in children with or without Down Syndrome (DS)

a) DS AMKL vs. TMD

Gene

Value 'A'

Value 'C'

Ratio 'A'/'C'

Location

Data points

SD

SD

'A'

'C'

'A'

'C'

Over-expressed genes

ZNF587B

615.0

39.7

15.498

19q13.43c

43

20

427.6

20.9

IFI27

467.8

34.8

13.431

14q32

36

11

90.0

91.4

SLITRK6

465.5

38.7

12.036

13q31.1

27

9

113.0

84.5

BST2 a

117.6

14.8

7.967

19p13.1

36

11

260.0

98.8

ZNF521

143.0

19.6

7.309

18q11.2

18

6

113.5

58.6

Under-expressed genes

    

ALS2CR12

4.2

15.8

0.268

2q33.1

18

6

80.3

103.2

GBP5

11.6

43.8

0.266

1p22.2

18

6

75.7

110.6

GHRH

14.7

67.1

0.219

20q11.2

43

20

97.7

257.0

SLFNL1 a

18.9

92.9

0.203

1p34.2

18

6

90.3

122.1

KIAA2022

24.3

297.9

0.081

Xq13.3

27

9

52.2

260.9

b) TMD vs. normal MK

Gene

Value 'C'

Value 'D'

Ratio 'C'/'D'

Location

Data points

SD

SD

'C'

'D'

'C'

'D'

Over-expressed genes

        

TMEM241

2,224.4

17.6

126.356

18q11.2

6

8

57.1

115.8

CMBL

1,063.5

11.7

91.126

5p15.2

9

8

168.8

30.1

PTGS2

2,256.4

59.2

38.145

1q25.2-q25.3

20

20

147.6

131.6

CGA

360.6

10.0

36.238

6q12-q21

14

19

159.7

27.3

TMEFF2

755.1

22.5

33.605

2q32.3

9

9

190.3

44.3

Under-expressed genes

        

ILDR1

18.3

4,333.8

0.004

3q13.33

6

9

58.9

63.3

DRD4

9.3

2,327.6

0.004

11p15.5

11

19

52.3

135.2

HIST3H3

5.2

1,313.0

0.004

1q42

11

19

36.2

137.9

LBX1

4.3

1,358.5

0.003

10q24

11

19

26.6

152.6

MAP3K10

7.4

2,352.3

0.003

19q13.2

11

19

28.8

135.1

c) TMD vs. normal CB MK

Gene

Value 'C'

Value 'E'

Ratio 'C'/'E'

Location

Data points

SD

SD

'C'

'E'

'C'

'E'

Over-expressed genes

CGA

360.6

8.0

44.869

6q12-q21

14

8

159.7

39.9

PTPRO b

523.1

15.1

34.680

12p13-p12

25

9

116.8

60.8

CLCA1 b

319.2

9.9

32.380

1p22.3

20

8

116.7

17.5

APOC2 ab

301.6

9.9

30.372

19q13.2

17

10

66.6

43.4

HDC ab

918.0

34.2

26.830

15q21-q22

11

8

59.9

168.1

Under-expressed genes

CDKL1

5.9

174.3

0.034

14q21.3

14

9

82.0

99.0

GNG11

34.3

1,042.3

0.033

7q21

11

8

80.1

81.2

RHOBTB1

7.7

241.3

0.032

10q21.2

20

8

49.7

97.4

RPS12

34.6

1,157.2

0.030

6q23.2

20

15

77.4

112.4

OLFM4

10.0

499.3

0.020

13q14.3

11

7

56.0

121.5