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Table 1 HS gene list

From: Transcriptomic signatures in whole blood of patients who acquire a chronic inflammatory response syndrome (CIRS) following an exposure to the marine toxin ciguatoxin

p value FC GeneSymbol Description Genbank Acc
3.36E-04 1.56 ATHL1 Acid trehalase-like 1 NM_025092
5.53E-03 -1.61 APCDD1 Adenomatosis polyposis coli down-regulated 1 NM_153000
2.02E-04 1.63 AEBP1 AE binding protein 1 NM_001129
1.47E-03 1.52 ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 NM_000927
2.91E-05 1.62 CELSR3 Cadherin, EGF LAG seven-pass G-type receptor 3 NM_001407
1.34E-03 1.62 CD274 CD274 molecule (CD274), transcript variant 1 NM_014143
7.44E-05 -1.56 CD36 CD36 molecule (thrombospondin receptor) NM_001001547
4.01E-04 -1.90 CD9 CD9 molecule NM_001769
9.33E-05 1.51 LOC100289090 cDNA FLJ33063 fis, clone TRACH2000047 AK057625
3.24E-04 1.60 LOC692247 cDNA FLJ36520 fis, clone TRACH2002100 AK093839
4.36E-03 1.51 C17orf66 Chromosome 17 open reading frame 66 NM_152781
4.00E-06 1.81 C6orf163 Chromosome 6 open reading frame 163 NM_001010868
7.42E-04 -1.68 CYB5R2 Cytochrome b5 reductase 2 NM_016229
1.33E-03 2.16 DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 NM_018665
7.91E-03 1.76 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 NC_018912.2
3.33E-07 1.51 N/A Formin-like 1 protein (Leukocyte formin) AC_000149.1
4.71E-04 1.67 GPR125 G protein-coupled receptor 125 NM_145290
8.75E-03 1.79 GATA2 GATA binding protein 2 (GATA2), transcript variant 1 NM_001145661
5.97E-03 1.54 GZMK Granzyme K (granzyme 3; tryptase II) NM_002104
3.89E-04 1.51 GBP5 Guanylate binding protein 5 variant 1 NM_052942
1.74E-03 1.53 LRRC37A4P Hypothetical protein LOC652203 BC107850
1.01E-03 -3.85 ITGB2 Integrin beta chain, beta 2 variant (Fragment) NC_018932.2
5.33E-03 -1.69 IL5RA Interleukin 5 receptor, alpha, variant 3 NM_175725
1.75E-03 1.66 NEAT1 lncRNA Nuclear paraspeckle assembly transcript 1 AF001893
6.55E-04 1.55 LINC00282 lncRNA 282 (LINC00282) NR_027047
1.08E-04 1.58 HYMAI lncRNA Hydatidiform mole associated and imprinted NR_002768
3.66E-04 1.74 LMF1 lncRNA Lipase maturation factor 1 variant 4 NR_036442
3.62E-05 -1.89 N/A lncRNA TCONS_l2_00011463 NC_018928
4.20E-03 -1.73 LYPD2 LY6/PLAUR domain containing 2 NM_205545
4.37E-03 -1.63 MARCO Macrophage receptor with collagenous structure NM_006770
1.85E-03 -2.43 N/A Major histocompatibility complex, class I, V (pseudogene) NC_018917
2.95E-03 -1.61 HLA-DQB1 MHC class II, DQ beta 1 variant 1 NM_002123
6.20E-03 -2.16 HLA-DQB1 MHC class II, DQ beta 1 variant 2 NM_001243961
8.09E-04 -1.54 HLA-DQB1 MHC class II, DQ beta 1 variant 3 NM_001243962
2.96E-04 -2.13 PADI6 Peptidyl arginine deiminase, type VI NM_207421
4.12E-05 -2.26 PEX6 Peroxisomal biogenesis factor 6 NM_000287
3.69E-04 -1.82 PEX6 Peroxisomal biogenesis factor 6 NM_000287
9.37E-03 1.55 PDE4DIP Phosphodiesterase 4D interacting protein variant 1 NM_014644
3.56E-03 1.80 PLGLB1 Plasminogen-like B1 BC022294
2.19E-03 1.51 LOC345051 Predicted: hCG38984 variant X1 XR_109844
3.22E-03 -1.74 PPP1R17 Protein phosphatase 1, regulatory subunit 17 variant 1 NM_006658
8.37E-03 -1.67 PDK4 Pyruvate dehydrogenase kinase, isozyme 4 NM_002612
2.41E-04 -1.51 ARHGAP22 Rho GTPase activating protein 22, variant 3 NM_021226
8.34E-04 1.52 ARHGEF1 Rho guanine nucleotide exchange factor (GEF) 1 AK090448
6.37E-03 7.57 SIGLEC14 Sialic acid binding Ig-like lectin 14 NM_001098612
8.88E-06 1.55 SIGIRR Single immunoglobulin and toll-interleukin 1 receptor XM_005253044
1.58E-04 1.53 TCRBV27 T cell receptor beta variable 27 AB305921
1.22E-03 2.02 TCRBV28 T cell receptor beta variable 28 AY751906
1.55E-03 2.34 TCRBV28 T cell receptor beta variable 28 AB305916
3.33E-04 1.51 TCRBV6 T cell receptor beta variable 6-4 A25966
6.60E-03 -1.77 TOLLIP Toll interacting protein NM_019009
3.79E-03 3.03 TUBB2A Tubulin, beta 2A class Iia NM_001069
1.36E-03 1.55 VIPR2 Vasoactive intestinal peptide receptor 2 NM_003382
3.82E-03 -1.71 VWF von Willebrand factor NM_000552
8.82E-03 2.74 ZFP57 ZFP57 zinc finger protein NM_001109809
  1. Genes that exhibited a FC > 1.5 and p < 0.01 in patients v controls. Bold shading indicates PCR analysis, italics indicates genes with the highest loading factors in PCA analysis. Genes sorted by description.