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Table 6 Genes with altered expression after in vivo exposure to high blood glucose

From: Metabolic changes in type 2 diabetes are reflected in peripheral blood cells, revealing aberrant cytotoxicity, a viral signature, and hypoxia inducible factor activity

Downregulated genes after hyperglycemia

      

Gene name

Symbol

Controls (n = 3)

MetS (n = 4)

T2DM (n = 6)

  

FC

q-value

FC

q-value

FC

q-value

Granzyme B

GZMB

0.42

0.00

0.71

0.00

0.97

98.95

Granulysin

GNLY

0.47

0.00

0.92

88.23

1.07

96.96

Perforin 1

PRF1

0.48

0.00

0.77

75.30

0.96

98.64

Fibroblast growth factor binding protein 2

FGFBP2

0.50

0.00

1.00

99.70

1.17

96.96

Chloride intracellular channel 3

CLIC3

0.56

0.00

0.95

93.51

1.03

98.21

Killer cell immunoglobulinlike receptor, two domains, long cytoplasmic tail, 4

KIR2DL4

0.62

0.00

0.89

65.06

1.05

96.96

Chromosome 1 open reading frame 162

C1orf162

0.66

0.00

0.75

0.00

0.90

81.90

Cystatin F (leukocystatin)

CST7

0.67

0.00

1.01

97.65

1.03

98.21

Galectin 1

LGALS1

0.68

0.00

0.97

98.10

0.97

98.72

FK506 binding protein 5

FKBP5

0.68

9.78

0.51

0.00

0.71

37.55

TSC22 domain family, member 3

TSC22D3

0.73

10.48

0.70

0.00

0.64

0.00

Dual specificity phosphatase 1

DUSP1

1.02

96.30

0.71

70.35

0.69

0.00

Myeloid cell leukemia sequence 1 (BCL2related)

MCL1

1.00

97.20

0.89

67.05

0.81

0.00

Upregulated genes after hyperglycemia

      

Interleukin 8

IL8

1.24

66.30

1.44

0.00

1.46

22.49

HIV1 Tat specific factor 1 pseudogene

LOC401233

1.18

67.90

1.24

0.00

1.07

96.96

  1. FC indicates fold change compare to baseline levels. q-value indicates the false discovery rate (%). Significant changes are indicated in bold (q < 5 %). Gene symbols indicated in bold are cytotoxicity related, and visualized in Fig. 4