Table 2 Categories of functionally enriched gene ontology (GO) biological processes (BPs) in the pink module. The latter is the cancer-associated module, and hub genes from this module are shown in the table

polyphosphate metabolic process

GO:0006797

5.789 × 10⁻⁰³

MINPP1

cellular response to vitamin D

GO:0071305

2.153 × 10⁻⁰⁵

AHR, APP, ATP2C1, CXCL5, CYP27B1, DFNA5, DKK1, DUSP6, EGFR, FGD6, GLS, GNB5, HMGA2, HOXA1, IL8, IRS1, ITGB1, MET, MTMR2, MYO5A, PANX1, PSPH, PTHLH, PTPRK, RAB8B, SLC12A2, SLC20A1, SNAI2, STC1, STK3, TNFRSF10B

mitotic G2 phase

GO:0000085

1.156 × 10⁻⁰³

APP, E2F3

regulation of single stranded viral RNA replication via double stranded DNA intermediate

GO:0045091

4.873 × 10⁻⁰⁴

AHR, APP, ATP2C1, CYP27B1, DFNA5, DKK1, DUSP6, E2F3, EGFR, FGD6, HMGA2, HOXA1, IL8, IRS1, ITGB1, LPCAT1, MET, MTMR2, PANX1, PLAG1, PTHLH, RAB8B, RSF1, SDC4, SLC20A1, SNAI2, STC1, STK3, TNFRSF10B

negative regulation of keratinocyte proliferation

GO:0010839

4.873 × 10⁻⁰⁴

APP, CXCL5, E2F3, EGFR, HMGA2, IRS1, ITGB1, MMP12, PLAG1, PTHLH, PTPRK, SNAI2

gland morphogenesis

GO:0022612

2.716 × 10⁻⁰⁵

AHR, APP, ATP2C1, CHSY1, COL4A5, CYP27B1, DFNA5, DKK1, DUSP6, EGFR, FGD6, GNA12, HMGA2, HOXA1, IL8, IRS1, ITGB1, LAMA3, LAMC2, LPCAT1, MET, MINPP1, MMP10, MMP12, MTMR2, MYO5A, PLAG1, PTHLH, SEMA3C, SLC12A2, SNAI2, SNX10, STC1