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Table 5 The diagnostic results with independent training and test sets for LGG data

From: Diagnostic biases in translational bioinformatics

Algorithm

Accuracy ± std (%)

Sensitivity ± std (%)

Specificity ± std (%)

NPR ± std (%)

PPR ± std (%)

  

GliomaRNASeq

   

DCA-SVM

99.52 ± 00.58

99.64 ± 00.53

97.00 ± 08.08

91.18 ± 11.05

99.87 ± 00.36

SVM-linear

95.87 ± 00.84

98.77 ± 00.00

12.10 ± 11.46

NaN

97.02 ± 00.85

SVM-rbf

96.68 ± 00.78

100.0 ± 00.00

00.00 ± 00.00

NaN

96.68 ± 00.78

SVM-quad

96.53 ± 00.75

99.60 ± 00.40

07.40 ± 08.67

NaN

96.91 ± 00.79

SVM-mlp

56.28 ± 05.61

56.73 ± 05.95

43.77 ± 18.61

03.34 ± 01.53

96.70 ± 01.31

  

GliomaMiRNASeq

   

DCA-SVM

99.63 ± 00.52

99.73 ± 00.39

97.52 ± 08.21

93.13 ± 09.40

99.89 ± 00.39

SVM-linear

93.78 ± 01.27

96.68 ± 01.58

10.93 ± 10.04

10.89 ± 11.08

96.89 ± 00.84

SVM-rbf

96.63 ± 00.81

100.0 ± 00.00

00.00 ± 00.00

NaN

96.63 ± 00.81

SVM-quad

95.65 ± 00.97

98.76 ± 00.87

06.14 ± 07.39

NaN

96.80 ± 00.79

SVM-mlp

56.62 ± 06.31

58.16 ± 06.69

42.51 ± 18.98

03.45 ± 01.74

96.68 ± 01.30