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Fig. 1 | BMC Medical Genomics

Fig. 1

From: Identification of potential mutations and genomic alterations in the epithelial and spindle cell components of biphasic synovial sarcomas using a human exome SNP chip

Fig. 1

Genome-wide analysis of a total of 2,345,678 SNPs in epithelial and spindle components in 12 cases of biphasic synovial sarcomas. a Manhattan plot showing negative log-transformed P-values of the case–control allele frequency significance on the y-axis. The color scale of the x-axis denotes chromosome numbers. Gene names associated with individual dots indicate SNPs of greatest significance or with potential disease relevance. b Mutation types of 343 SNPs meeting the established criterion for genome-wide significance (P < 0.05, chi square test)

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