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Table 4 Top 10 better-estimated KEGG pathways per subtype

From: Identifying subtype-specific associations between gene expression and DNA methylation profiles in breast cancer

HER2 positive

Triple negative

GLYCOLYSIS_GLUCONEOGENESIS

GLYCOLYSIS_GLUCONEOGENESIS

CITRATE_CYCLE_TCA_CYCLE

CITRATE_CYCLE_TCA_CYCLE

PENTOSE_PHOSPHATE_PATHWAY

PENTOSE_PHOSPHATE_PATHWAY

FRUCTOSE_AND_MANNOSE_METABOLISM

PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS

GALACTOSE_METABOLISM

FRUCTOSE_AND_MANNOSE_METABOLISM

FATTY_ACID_METABOLISM

GALACTOSE_METABOLISM

STEROID_BIOSYNTHESIS

ASCORBATE_AND_ALDARATE_METABOLISM

PRIMARY_BILE_ACID_BIOSYNTHESIS

FATTY_ACID_METABOLISM

OXIDATIVE_PHOSPHORYLATION

STEROID_BIOSYNTHESIS

PURINE_METABOLISM

PRIMARY_BILE_ACID_BIOSYNTHESIS

Luminal A

Luminal B

GLYCOLYSIS_GLUCONEOGENESIS

GLYCOLYSIS_GLUCONEOGENESIS

PENTOSE_PHOSPHATE_PATHWAY

CITRATE_CYCLE_TCA_CYCLE

PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS

PENTOSE_PHOSPHATE_PATHWAY

FRUCTOSE_AND_MANNOSE_METABOLISM

PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS

GALACTOSE_METABOLISM

FRUCTOSE_AND_MANNOSE_METABOLISM

ASCORBATE_AND_ALDARATE_METABOLISM

GALACTOSE_METABOLISM

FATTY_ACID_METABOLISM

ASCORBATE_AND_ALDARATE_METABOLISM

STEROID_BIOSYNTHESIS

FATTY_ACID_METABOLISM

PRIMARY_BILE_ACID_BIOSYNTHESIS

STEROID_BIOSYNTHESIS

STEROID_HORMONE_BIOSYNTHESIS

PRIMARY_BILE_ACID_BIOSYNTHESIS