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Table 4 Top 10 better-estimated KEGG pathways per subtype

From: Identifying subtype-specific associations between gene expression and DNA methylation profiles in breast cancer

HER2 positive Triple negative
GLYCOLYSIS_GLUCONEOGENESIS GLYCOLYSIS_GLUCONEOGENESIS
CITRATE_CYCLE_TCA_CYCLE CITRATE_CYCLE_TCA_CYCLE
PENTOSE_PHOSPHATE_PATHWAY PENTOSE_PHOSPHATE_PATHWAY
FRUCTOSE_AND_MANNOSE_METABOLISM PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS
GALACTOSE_METABOLISM FRUCTOSE_AND_MANNOSE_METABOLISM
FATTY_ACID_METABOLISM GALACTOSE_METABOLISM
STEROID_BIOSYNTHESIS ASCORBATE_AND_ALDARATE_METABOLISM
PRIMARY_BILE_ACID_BIOSYNTHESIS FATTY_ACID_METABOLISM
OXIDATIVE_PHOSPHORYLATION STEROID_BIOSYNTHESIS
PURINE_METABOLISM PRIMARY_BILE_ACID_BIOSYNTHESIS
Luminal A Luminal B
GLYCOLYSIS_GLUCONEOGENESIS GLYCOLYSIS_GLUCONEOGENESIS
PENTOSE_PHOSPHATE_PATHWAY CITRATE_CYCLE_TCA_CYCLE
PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS PENTOSE_PHOSPHATE_PATHWAY
FRUCTOSE_AND_MANNOSE_METABOLISM PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS
GALACTOSE_METABOLISM FRUCTOSE_AND_MANNOSE_METABOLISM
ASCORBATE_AND_ALDARATE_METABOLISM GALACTOSE_METABOLISM
FATTY_ACID_METABOLISM ASCORBATE_AND_ALDARATE_METABOLISM
STEROID_BIOSYNTHESIS FATTY_ACID_METABOLISM
PRIMARY_BILE_ACID_BIOSYNTHESIS STEROID_BIOSYNTHESIS
STEROID_HORMONE_BIOSYNTHESIS PRIMARY_BILE_ACID_BIOSYNTHESIS