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Table 3 cis eQTL relationships involving variants close to regions associated with AF via genome-wide association studies

From: Post-operative atrial fibrillation examined using whole-genome RNA sequencing in human left atrial tissue

SNP Gene Chromosome SNP Location p-value FDR adjusted p-value
rs60632610 MYOZ1 10 75,415,677 1.7 × 10-14 3.5 × 10-10
rs10894154 CNTN5 11 99,781,954 2.8 × 10-6 0.007
rs4437927 FMO6P 1 170,196,342 6.2 × 10-6 0.01
rs9409797 MIR27B 9 97,276,713 6.5 × 10-6 0.01
rs6590399 CNTN5 11 99,759,525 7.4 × 10-6 0.01
rs8847 RIT1 1 155,259,323 1.0 × 10-5 0.02
rs305043 PAQR5 15 70,088,292 1.8 × 10-5 0.03
rs10908463 RIT1 1 155,286,258 2.2 × 10-5 0.03
rs11264341 GBAP1 1 155,151,493 3.1 × 10-5 0.04
  1. Shown are all significant cis eQTL relationships (at FDR-adjusted p-value < 0.05) between SNPs previously characterized as being associated with AF and genes within 500 kb [23]. For each gene, the most significant eQTL relationship is shown. Variant location is in coordinates from the UCSC hg19 genome annotation