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Table 4 System settings for the iDash Challenge

From: Efficient and secure outsourcing of genomic data storage

Query

1a

2a

3a

 DATA_HASH_SIZE

48

48

48

 BITS FOR MAPPING

13

17

17

 NUM_ENTRIES

8192

131072

-

 ROW_SIZE

6

6

6

 ENCRYPTION MODE

80:1024:62:14

-

-

 AGGREGATION

4

4

4

 DIMENSIONALITY

2 (46*45)

3 (32*32*32)

-

Query

1b

2b

3b

 DATA_HASH_SIZE

48

48

48

 BITS FOR MAPPING

4

9

9

 NUM_ENTRIES

16

512

512

 ROW_SIZE

672

256

256

 ENCRYPTION MODE

80:1024:62:14

-

-

 AGGREGATION

2

2

2

 DIMENSIONALITY

1 (8)

2 (16 ×16)

2 (16 ×16)

  1. Each setup pertains to a single query scenario →1: “query 4 variants in one single VCF file with 10,000 variants”; 2: “query 4 variants in one single VCF file with 100,000 variants”; 3: “query the same variant in 50 different VCF files with 100,000 variants”