Table 1 Evaluating the threshold \(t^{\prime }_{0.05}\) for three different databases with δ=10−3 mismatch error
From: Aftermath of bustamante attack on genomic beacon service
Beacon database | Number of records N | a ′ | b ′ | D N | \(t^{\prime }_{\alpha }\) |
|---|---|---|---|---|---|
1k Genomes Phase 1 | 1092 | 0.0735 | 1.0096 | 0.0005594974767507827 | 1826 |
1k Genomes Phase 1 Affymetrix | 1074 | 0.6483 | 1.2876 | 1.5352703647724165e-05 | 99084 |
GoNL | 498 | 0.1131 | 0.8574 | 0.0009412979457329326 | 1005 |
SSMP | 100 | 0.1848 | 0.8500 | 0.00403048895537907 | 234 |
Simulation | 2000 | 0.1178793 | 1.1188360 | 0.00022374264418961542 | 4900 |