Table 1 Parameter settings for the experiments
From: Controlling the signal: Practical privacy protection of genomic data sharing through Beacon services
Parameter | Notation | Setting |
|---|---|---|
Size of pool | n | 250 |
Number of SNVs | m | 400,000 |
Maximal allowable false positive rate | α | 0.05 |
Sequencing error rate | δ | 0.000001 |
Number of sampled query sequences | q | 5 |
Number of examined neighbors | l | 2 |
Percentage of flipped answers | k | 5 |
Noise level in the Random Flip method | ε | 0.75 |
Maximal allowable power in the query budget method | β | 0.9 |