Table 2 Summary statistics of phylogeography metrics for the GI (n = 102, 1623 nt) and GII (n = 374, 1623 nt) NoVs in Chinaa
From: Genomic diversity and phylogeography of norovirus in China
Genotype | Molecular clock | KL | Association index | Parsimony score | ||||
|---|---|---|---|---|---|---|---|---|
Observed | Expected | P value | Observed | Expected | P value | |||
GI | Strict | 0.070 | 7.87 (6.96, 8.78) | 8.95 (8.32, 9.46) | 0.004 | 65.92 (64.00, 68.00) | 70.87 (67.74, 73.84) | 0.004 |
GI | UCLN | 0.077 | 8.04 (7.11, 8.95) | 9.19 (8.58, 9.73) | 0.006 | 65.63 (64.00, 68.00) | 70.85 (67.76, 73.67) | 0.006 |
GI | UCED | 0.096 | 8.05 (7.13, 8.98) | 9.20 (8.58, 9.71) | 0.002 | 65.66 (64.00, 68.00) | 70.77 (67.75, 73.43) | 0.006 |
GII | Strict | 0.008 | 28.67 (26.75, 30.53) | 37.73 (36.62, 38.75) | 0.000 | 221.20 (215.00, 227.00) | 273.05 (266.96, 278.76) | 0.000 |
GII | UCLN | 0.004 | 28.53 (26.57, 30.46) | 37.55 (36.49, 38.59) | 0.000 | 218.40 (212.00, 224.00) | 272.91 (267.52, 278.29) | 0.000 |
GII | UCED | 0.009 | 28.54 (26.58, 30.57) | 37.56 (36.39, 38.59) | 0.000 | 218.67 (213.00, 225.00) | 272.95 (267.31, 278.30) | 0.000 |