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Table 3 Description of clusters predicted by several clustering algorithms

From: iOPTICS-GSO for identifying protein complexes from dynamic PPI networks

Algorithms

Category

Cluster

Average Size

DIP

Krogan

MIPS

Gavin

DIP

Krogan

MIPS

Gavin

CMC [16]

Density

1263

907

168

486

4.39

4.56

5.55

COACH [17]

Core

903

547

448

361

3.89

8.97

8.26

MCL [19]

Flow

623

932

425

6.57

3.62

3.93

MCODE [15]

Density

63

85

85

150

19.00

5.88

6.63

ClusterOne [18]

Graph

372

373

256

312

4.90

4.29

6.35

CFinder [14]

Density

609

88

137

6.18

12.73

9.6

DBSCAN [19]

Density

492

96

130

24

6.26

34.43

14.3

12.7

OPTICS

Density

107

278

439

108

5.90

4.17

9

13.5

OPTICS_PSO [20]

Density

76

119

98

84

5.59

8.05

33

8.45

iOPTICS-GSO

Density

99

143

86

101

5.76

5.62

26.5

8.14