Table 2 Library statistics
Library | BBC (normal) | EJC (normal) | BC0145 (EOBC) | BC0190 (EOBC) | CGBC025 (EOBC) |
|---|---|---|---|---|---|
Raw PE reads | 384,623,309 | 420,790,943 | 392,322,204 | 434,928,103 | 628,712,403 |
Quality PE reads | 371,837,085 | 388,551,037 | 375,255,962 | 426,187,686 | 579,192,276 |
Normalization factor | 372 | 389 | 375 | 426 | 579 |
hg19-mapped reads (%) | 351,841,885 (94.62%) | 376,097,300 (96.79%) | 345,714,693 (92.13%) | 409,083,110 (95.99%) | 551,181,421 (95.16%) |
hg19-unmappable PE reads (%) | 19,995,200 (5.38%) | 12,453,737 (3.21%) | 29,541,269 (7.87%) | 17,104,576 (4.01%) | 28,010,855 (4.84%) |