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Table 1 Comparison of the web-based tools for visualizing cancer omics data

From: CAS-viewer: web-based tool for splicing-guided integrative analysis of multi-omics cancer data

 

Alternative splicing

Methylation

miRNA

SNP

Clinical data

cBioPortal [6]

x

x

x

o

o

FireBrowse [21]

x

o

o

o

o

MEXPRESS [10]

x

o

x

x

o

Vials [8]

o

x

x

x

x

SpliceSeq [9] and TCGASpliceSeq [22]

o

x

x

x

x

ISOexpresso [23]

o

x

x

x

o

CAS-viewer

o

o

o

o

o

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BMC Medical Genomics

ISSN: 1755-8794

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