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Table 4 Regulatory miRNAs associated with the common PD-specific genes identified in blood and the analysis of lncRNAs associated with these miRNAs

From: A meta-analysis of public microarray data identifies biological regulatory networks in Parkinson’s disease

PD specific genes miRNAs associated with genes lncRNAs associated with the miRNAs
HSPA6 hsa-miR-204-3pb LINC00999
hsa-miR-548o-3p CASC7, GABPB1-AS1, NEAT1, XIST
MAP2K6 hsa-miR-33a-5pa KCNQ1OT1, MCF2L-AS1
hsa-miR-590-3pa CASC7, CTA-292E10.9, CTB-89H12.4, HCG11, LINC00657, LOC100507577, NEAT1, OIP5-AS1, OTUD6B-AS1, RP11-834C11.4, XIST
hsa-miR-145-5pa KCNQ1OT1,TUG1
hsa-miR-425-5p C1orf132, CTD-3025 N20.3, KCNQ1OT1, RP11-15H20.7, SNHG14, TTTY15, ZNRD1-AS1
hsa-miR-1306-5p KCNQ1OT1, SENP3-EIF4A1
hsa-miR-148a-3pa CASC7, KCNQ1OT1, OIP5-AS1, SNHG14
hsa-miR-130a-3pa CASC7, H19, SNHG14
hsa-miR-148b-3pa CASC7, OIP5-AS1, SLMO2-ATP5E, SNHG14
SRPK2 hsa-miR-3200-3p BLOC1S5-TXNDC5, KCNQ1OT1, XIST
hsa-miR-1292  
hsa-miR-155-5p CTD-2561 J22.5, RP11-175O19.4, XIST
hsa-miR-15b-3pa  
hsa-miR-17-3pb RP3-323A16.1, XIST
hsa-miR-181a-5pb AC000403.4, CASC7, CTB-89H12.4, KCNQ1OT1, LINC00506, N4BP2L2-IT2, RP11-10E18.7, RP11-1134I14.8, RP11-147 L13.14, RP11-314B1.2, RP11-361F15.2, RP11-707A18.1, RP1-309I22.2, ZNF883, ZNRD1-AS1
hsa-miR-181b-5pb CASC7, CTB-89H12.4, KCNQ1OT1, RP11-1134I14.8, XIST
hsa-miR-181c-5pb CTB-89H12.4, KCNIP4-IT1, KCNQ1OT1, RP11-1134I14.8
hsa-miR-181db  
hsa-miR-183-3pa  
hsa-miR-1976 HNRNPUL2-BSCL2, KCNQ1OT1, LOC100129917, NEAT1, TSIX
hsa-miR-19a-3pb FAM201A, H19, KCNA3, KCNQ1OT1, LINC00094, RP11-337C18.8, RP11-523G9.3, SNHG14
hsa-miR-19b-3pb CASC7, FAM201A, H19, KCNA3, KCNQ1OT1, LINC00094, RP11-337C18.8, RP11-523G9.3, SNHG14
hsa-miR-21-5pa  
hsa-miR-320a ALMS1-IT1, CASC7, CTB-36H16.2, CTB-89H12.4, KCNIP4-IT1, LINC00663, LMCD1-AS1, MALAT1, NEAT1, RP11-145P16.3, XIST
hsa-miR-3685 KCNQ1OT1
hsa-miR-3689a-3p TTTY15
hsa-miR-4518  
hsa-miR-944  
NOL7 hsa-miR-199b-3pa CTB-89H12.4, ERVK3–1, XIST
hsa-miR-199a-3pb CTB-89H12.4, ERVK3–1, XIST
hsa-miR-328  
hsa-miR-129-5pa CASC7, ERVK3–1, KCNQ1OT1, MALAT1, NEAT1,
hsa-miR-374a-5pa CTC-444 N24.11, CTD-2561 J22.5, RP11-613D13.5, TRG-AS1, XIST, ZNRD1-AS1
hsa-miR-744-5p FLJ16779,
hsa-miR-374b-5pa CTA-292E10.9, CTC-444 N24.11, OIP5-AS1, RP11-221 J22.1, RP11-38P22.2, XIST,
hsa-miR-548o-3p CASC7, GABPB1-AS1, NEAT1, XIST,
  1. aPreviously associated with several neurodegenerative diseases, but not PD
  2. bPreviously associated with PD