Table 2 Allele and genotype frequencies of SNPs in CP patients and controls
Group | Allele frequency | P | OR (95% CI) | Genotype frequency | P | Hardy-Weinberg equilibrium test | |||
|---|---|---|---|---|---|---|---|---|---|
rs3782219 | C | T | Â | Â | C/C | Â | T/T | Â | Â |
Case | 764 (0.586) | 540 (0.414) | 0.242 | 0.910 | 216 (0.331) | Â | 104 (0.160) | 0.354 | 0.936 |
Control | 774 (0.608) | 498 (0.392) | (0.778~ 1.066) | 235 (0.369) | 0.939 | 97 (0.153) |  | ||
rs6490121 | A | G | Â | Â | A/A | Â | GG | Â | Â |
Case | 831(0.637) | 473(0.363) | 0.888 | 0.989 | 268(0.411) | Â | 89(0.137) | 0.585 | 0.0470 |
Control | 814(0.640) | 458 (0.360) | (0.842~ 1.1609) | 272 (0.428) | 0.047 | 94 (0.148) |  | ||
rs2293054 | A | G | Â | Â | A/A | Â | G/G | Â | Â |
Case | 270 (0.207) | 1034 (0.793) | 0.607 | 1.052 | 29 (0.044) | Â | 411 (0.630) | 0.877 | 0.204 |
Control | 253 (0.199) | 1019 (0.801) | (0.868~ 1.274) | 26 (0.041) | 0.204 | 409 (0.643) |  | ||
rs10774909 | C | G | Â | Â | C/C | Â | G/G | Â | Â |
Case | 887 (0.680) | 417 (0.320) | 0.958 | 1.004463 | 293 (0.449) | Â | 58 (0.089) | 0.496 | 0.107 |
Control | 864 (0.679) | 408 (0.321) | (0.8512~ 1.185) | 294 (0.462) | 0.107 | 66 (0.104) |  | ||
rs3741475 | A | G | Â | Â | A/A | Â | G/G | Â | Â |
Case | 335 (0.257) | 969 (0.743) | 0.519 | 0.944 | 35 (0.054) | Â | 352 (0.540) | 0.094 | 0.918 |
Control | 341 (0.268) | 931 (0.732) | (0.792~ 1.125) | 52 (0.082) | 0.918 | 347 (0.546) |  | ||
rs2682826 | A | G | Â | Â | A/A | Â | G/G | Â | Â |
Case | 335 (0.257) | 969 (0.743) | 0.709 | 0.967 | 34 (0.052) | Â | 351 (0.538) | 0.046 | 0.835 |
Control | 335 (0.263) | 937 (0.737) | (0.811~ 1.153) | 52 (0.082) | 0.835 | 353 (0.555) |  | ||