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Table 1 Simple parameter network analysis [15] of disease-level and pathway-level networks

From: Pathway networks generated from human disease phenome

 

Disease-level Network

Pathway-level Network

Number of nodes

213

102

Number of edges

2079

857

Clustering coefficient

0.835

0.722

Connected components

15

6

Network diameter

4

5

Shortest paths

19,514 (43%)

6302 (61%)

Characteristic path length

2.322

2.029

Avg. number of neighbors

19.521

16.804

Network density

0.092

0.166

Network heterogeneity

1.042

0.961

  1. The network parameters were calculated from connected nodes only (with at least one edge)