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Table 1 Primer information: sequences and length of the amplified fragment

From: Progression-specific genes identified in microdissected formalin-fixed and paraffin-embedded tissue containing matched ductal carcinoma in situ and invasive ductal breast cancers

Gene RefSeq_ID Primer sequences (sense and antisense) Size
COL10A1 NM_000493.3 5′- CCTACTCCTTATTTACGACGCAAT-3′
5′- TGAAAAGCCTTGAAAGAATGG-3’
107 bp
COL11A1 NM_001854.2 5’-TGATAATTTATGACAAAAGAACATACC-3′
5’-CCAGGTAGCCAAGACTTGAGTTTA-3’
94 bp
CSPG2 NM_004385.2 5’-GAATGGGATCCTGATGGAAC-3′
5’-AGTCCTCCATTCAGGCCTTT-3’
96 bp
GREM1 NM_013372.5 5’- TCATTTAAAAACGGCAAAGAA-3′
5′- TTCATGAAACTTGAAGCCAAA-3’
111 bp
KRT14 NM_000526.3 5’- CAGATCCCACTGGAAGATCC-3′
5′- AAGCTGTATTGATTGCCAGGA-3’
92 bp
MMP11 NM_005940.3 5’- AATCCAGGCCAAAAAGTTCA-3′
5′- CCTGGGACAGGATTGAGGTA-3’
100 bp
PLEKHC1 NM_006832.1 5’-GGCCATGTTCTAGTCTGTTGC-3′
5’-CTCTCCCTCGCACCCTTT-3’
93 bp
SULF1 NM_015170.1 5’- CAAATTAGCTGCTTGCCTGA-3′
5′- AACTTGAAATCTTTTTACAAAGCACA-3’
99 bp
THBS2 NM_003247.2 5’-AGGTTGATGAAACGTCATGTG-3′
5’-AAGTGCAGGGTTTCAGTGGT-3’
93 bp
GAPDH NM_002046.3 5’-CTCCTCACAGTTGCCATGTA-3′
5′- GCACAGGGTACTTTATTTGATGG-3’
90 bp
ACTB NM_007393 5’-TCCCCCAACTTGAGATGTATGAAG-3′
5’-AACTGGTCTCAAGTCAGTGTACAGG-3’
90 bp
YWHAZ NM_003406.2 5’- TGGAGGGTCGTCTCAAGTAT-3′
5′- GCTCCGTCTCAATTTTCTCTC-3’
94 bp