|  | Fresh frozen investigation | FFPE investigation | ||
---|---|---|---|---|---|
Gene | RefSeq_ID | logFC | p-value | fold change | t-test p-value |
COL10A1 | NM_000493.3 | 5.11 | 4.34E-05 | 1.86 | 0.06 |
MMP11 | NM_005940.3 | 5.09 | 4.92E-06 | 2.31 | 0.0042 |
COL11A1 | NM_001854.2 | 3.64 | 4.75E-05 | 1.96 | 0.0006 |
THBS2 | NM_003247.2 | 3.50 | 4.34E-05 | 1.02 | 0.0479 |
CSPG2 | NM_004385.2 | 3.23 | 0.00126 | 2.74 | 0.0033 |
GREM1 | NM_013372.5 | 3.02 | 7.36E-05 | 1.85 | 0.0033 |
SULF1 | NM_015170.1 | 2.15 | 0.000101 | 1.40 | 0.0553 |
PLEKHC1 | NM_006832.1 | 1.84 | 0.000101 | 0.33 | 0.5244 |
KRT14 | NM_000526.3 | −4.00 | 0.00433 | −1.74 | 0.0015 |