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Table 1 The top mutated genes in the TCGA 1044 breast cancer dataset

From: Toward the precision breast cancer survival prediction utilizing combined whole genome-wide expression and somatic mutation analysis

Gene A Gene B A Not B B Not A Both Log Odds Ratio Adjusted p-Value Tendency
TP53 CDH1 338 125 9 −2.067 <  0.001 Mutual exclusivity
TP53 GATA3 336 116 11 −1.771 <  0.001 Mutual exclusivity
TP53 MAP3K1 336 79 11 −1.327 <  0.001 Mutual exclusivity
TP53 PIK3CA 265 266 82 −0.641 <  0.001 Mutual exclusivity
PIK3CA CDH1 284 70 64 0.735 0.002 Co-occurrence
TP53 TTN 264 104 83 0.62 0.004 Co-occurrence
PIK3CA KMT2C 296 55 52 0.75 0.006 Co-occurrence
TTN KMT2C 154 74 33 0.846 0.007 Co-occurrence
PIK3CA MAP3K1 303 45 45 0.798 0.008 Co-occurrence
TTN MUC16 146 68 41 1.209 <  0.001 Co-occurrence