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Table 1 Comparison of CRlncRNA with other cancer-related lncRNA databases

From: CRlncRNA: a manually curated database of cancer-related long non-coding RNAs with experimental proof of functions on clinicopathological and molecular features

Database lncRNA number Basic data requirement lncRNA sequence Expression profile Gene interaction Cancer hallmarks Clinical parameters
Lnc2Cancer 666 Expressiona × × × × ×
lnCaNet 9641 Expressionb × ×
lncRNADisease 2478 Predictionc × × ×
Lnc2Catlas 27,670 Noned × ×
TANRIC 12,727 Nonee × ×
CRlncRNA 355 Functionalf
  1. aDifferential expression between cancer and normal samples
  2. bCo-expression with cancer-related protein-coding genes
  3. cMore than half of the collected lncRNAs are predicted base on its genomic context
  4. dAll lncRNAs from GENCODE database
  5. eAll intergenic lncRNAs from GENCODE database
  6. fLow-throughput functional experiments