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Table 5 Repeats in L020 family confirmed potential phenotypical relevance for XLID25 allele upon a control screening

From: Mapping the landscape of tandem repeat variability by targeted long read single molecule sequencing in familial X-linked intellectual disability

` Start End Name code Unit length Copies Purity Unit seq. Annotation L020 (=5X) family Control unaffected males
5X4 5X7 5X15 5X19 5X17 5X18 Pro-band Co4 Co5 Co7 Co8 LG GW LR MA VF RL DPS GR VR PB
chrX 44,007,461 44,007,502 XLID2 2 21 90.5 GT ThreePrimeUTR 354 364 354 364 364 364 354 354 354 354 354 358 364 354 368 362 354 354 354 354 364 354 356
chrX 45,046,714 45,046,751 XLID20 2 19 100 CA oregannoTFBS 230 234 230 234 230 230 234 234 234 238 232 228 228 236 230 236 234 230 230 232 230 234 226
chrX 45,386,687 45,386,738 XLID22 2 26 100 CA Downstream 122 134 122 134 122 122 134 134 134 138 132 130 134 134 132 122        
chrX 45,606,270 45,606,355 XLID25 2 43 79.1 GT Downstream 372 376 372 376 372 372 376 376 376 354 366 372 366 372 366 364 372 374 366 372 372 372 366
chrX 45,709,592 45,709,631 XLID27 2 20 100 GT NonCoding 415 421 415 421 421 421 415 415 415 415 415 419 424 415 415 423        
  1. Proband, 5X17, 5X18 – affected family members, 5X15, 5X19 – unaffected males, 5X4, 5X7 – carriers of the disease-related haplotype. Allele size is given in base pairs. Alleles found in the individual with ID are in bold: 354, 234, 134, 376 and 415 for the tandem repeats XLID2, XLID20, XLID22, XLID25 and XLID27 respectively