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Table 3 Genes found in prognostic somatic mutation gene signatures for COAD

From: Development of somatic mutation signatures for risk stratification and prognosis in lung and colorectal adenocarcinomas

Gene Symbol

MFR

TMF

BMF

NetNorM

ABCB5

FALSE

FALSE

FALSE

TRUE

ACSM5

FALSE

FALSE

FALSE

TRUE

ARHGAP15

TRUE

FALSE

FALSE

FALSE

C11orf53

TRUE

FALSE

FALSE

FALSE

C8B

FALSE

FALSE

TRUE

TRUE

CAPN9

FALSE

TRUE

FALSE

FALSE

CARD11

FALSE

FALSE

FALSE

TRUE

CDH24

TRUE

FALSE

TRUE

FALSE

CER1

TRUE

TRUE

TRUE

FALSE

CHI3L1

TRUE

FALSE

FALSE

FALSE

COG7

TRUE

FALSE

FALSE

FALSE

COL4A4

FALSE

TRUE

FALSE

FALSE

COL9A1

FALSE

FALSE

FALSE

TRUE

CTGLF11P

FALSE

TRUE

FALSE

FALSE

DCAF12

FALSE

TRUE

FALSE

FALSE

DGKB

FALSE

FALSE

FALSE

TRUE

DMKN

TRUE

FALSE

TRUE

FALSE

DNALI1

TRUE

FALSE

TRUE

FALSE

DOCK3

FALSE

FALSE

FALSE

TRUE

EIF3F

FALSE

FALSE

FALSE

TRUE

FBXO38

TRUE

FALSE

FALSE

FALSE

FOXD4L6

FALSE

TRUE

FALSE

FALSE

FSHR

FALSE

TRUE

FALSE

FALSE

GRPR

FALSE

TRUE

FALSE

FALSE

H2AFY2

FALSE

FALSE

TRUE

FALSE

HIF1AN

FALSE

TRUE

FALSE

FALSE

IGHA1

TRUE

FALSE

FALSE

FALSE

IQCH

TRUE

FALSE

FALSE

FALSE

KANSL3

TRUE

TRUE

FALSE

FALSE

KRT73

FALSE

FALSE

FALSE

TRUE

MARCH11

TRUE

FALSE

TRUE

FALSE

MEOX1

TRUE

FALSE

FALSE

FALSE

METTL21C

TRUE

FALSE

TRUE

TRUE

MICA

TRUE

TRUE

TRUE

FALSE

NAV1

FALSE

FALSE

TRUE

FALSE

NKD1

TRUE

TRUE

TRUE

FALSE

NTSR1

FALSE

TRUE

FALSE

FALSE

OGFR

FALSE

FALSE

FALSE

TRUE

OR10A7

FALSE

TRUE

FALSE

FALSE

OR10H2

FALSE

FALSE

FALSE

TRUE

OR11H1

FALSE

FALSE

FALSE

TRUE

OR13C8

FALSE

TRUE

FALSE

FALSE

OR1D5

FALSE

FALSE

TRUE

TRUE

PDHB

TRUE

FALSE

FALSE

FALSE

PDPR

FALSE

FALSE

FALSE

TRUE

PRKG2

TRUE

FALSE

FALSE

FALSE

PSMD2

TRUE

FALSE

FALSE

FALSE

RANBP17

TRUE

FALSE

FALSE

TRUE

RARG

FALSE

TRUE

FALSE

FALSE

RBM22

FALSE

FALSE

FALSE

TRUE

RERG

TRUE

FALSE

TRUE

FALSE

RP11.231C14.4

TRUE

FALSE

FALSE

FALSE

SAGE1

FALSE

TRUE

FALSE

FALSE

SCD5

FALSE

TRUE

FALSE

FALSE

SDR9C7

TRUE

FALSE

FALSE

FALSE

SERPINB3

TRUE

TRUE

FALSE

FALSE

SPDYE5

FALSE

TRUE

FALSE

FALSE

SUSD2

FALSE

FALSE

FALSE

TRUE

TREH

FALSE

FALSE

FALSE

TRUE

UBL4B

FALSE

TRUE

FALSE

FALSE

UBTD1

TRUE

FALSE

FALSE

FALSE

UBTFL1

TRUE

FALSE

FALSE

FALSE

USP50

TRUE

FALSE

FALSE

FALSE

VPS36

FALSE

FALSE

FALSE

TRUE

WDR7

FALSE

FALSE

FALSE

TRUE

ZNF133

TRUE

TRUE

FALSE

FALSE

ZNF214

TRUE

TRUE

TRUE

FALSE

ZNF586

TRUE

FALSE

FALSE

FALSE

ZNF83

TRUE

FALSE

FALSE

FALSE

  1. List of somatically mutated genes selected by the pipeline for COAD using each type of somatic mutation profiles
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BMC Medical Genomics

ISSN: 1755-8794

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