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Table 1 Datasets and their source for healthy and pediatric sarcoma patients

From: Integration of genomic copy number variations and chemotherapy-response biomarkers in pediatric sarcoma

Data Type

Source

Platform

Sample size

Healthy Individuals

DGV (Database of Genomic Variants) [13]

BAC Acgh, FISH, OligoACGH, PCR, Sequencing, SNP array and Digital array

22, 255

Osteosarcoma (OS)

GEO (GSE33383)

TARGET

Affymetrix Genome-Wide Human SNP

6.0 Array chips, GPL6801

32

85

Rhabdomyosarcoma (RMS)

GEO (GSE24715)

Affymetrix Mapping 250 K Sty2 SNP chips, GPL3720

7

Affymetrix Human Mapping 50 K Xba240 SNP chips, GPL2005

57

Ewing Sarcoma (ESFTs)

GEO (GSE8398)

Agilent-013282 Human Genome CGH Microarray 44B, GPL2879

25

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BMC Medical Genomics

ISSN: 1755-8794

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