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Table 2 Rates of genotypes of analyzed genes in groups of patients with optimal and non-optimal response to TKI therapy

From: Exome, transcriptome and miRNA analysis don’t reveal any molecular markers of TKI efficacy in primary CML patients

Gene and reference SNP

Reference allele

Variant allele

 

Patients with optimal response at 6 months (n = 32)

Patients with non-optimal response at 6 months (n = 30)

р-value

ANKRD35

rs11579366

G

C

genotype

G/G

G/C

C/C

G/G

G/C

C/C

0,16

rate, %

9

50

41

29

39

32

DNAH9

rs1990236

G

A

genotype

G/G

G/A

A/A

G/G

G/A

A/A

0,33

rate, %

72

22

6

57

39

4

MAGEC1

rs176037

C

T

genotype

C/C

C/T

T/T

C/C

C/T

T/T

0,68

rate, %

53

20

27

41

32

27

TOX3

rs10653661

A

ATTTCT

genotype

A/A

A/ ATTTCT

ATTTCT/ ATTTCT

A/A

A/ ATTTCT

ATTTCT/ ATTTCT

0,87

rate, %

22

56

22

23

50

27

THSD1

rs3803264

G

A

genotype

G/G

G/A

A/A

G/G

G/A

A/A

0,38

rate, %

6

44

50

12

27

61

MORN2

rs3099950

G

A

genotype

G/G

G/A

A/A

G/G

G/A

A/A

0,48

rate, %

69

31

0

77

23

0

PTCRA

rs9471966

G

A

genotype

G/G

G/A

A/A

G/G

G/A

A/A

0,88

rate, %

56

38

6

50

43

7

  1. SNP single nucleotide polymorphism