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Table 5 15 GWAS SNPs overlap with ENCODE ChIP-Seq TFBS profiles (161 TFs; http://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRegTfbsClustered/)

From: FTO haplotyping underlines high obesity risk for European populations

rs_id

pos

TF

Score

Peak size, bp

rs9940128

53,800,753

EP300

763

390

rs9940128

53,800,753

FOSL2

424

260

rs9940128

53,800,753

NFIC

351

544

rs9940128

53,800,753

SP1

273

336

rs9940128

53,800,753

JUND

211

332

rs9940128

53,800,753

TEAD4

173

440

rs9940128

53,800,753

FOXA2

183

290

rs9940128

53,800,753

MYBL2

403

616

rs9940128

53,800,753

FOS

339

283

rs9940128

53,800,753

STAT3

241

336

rs1421085

53,800,953

FOS

339

283

rs1121980

53,809,246

USF1

144

264

rs1121980

53,809,246

SPI1

216

263

rs62033400

53,811,787

MAFK

266

287

rs8050136

53,816,274

EP300

268

330

rs8050136

53,816,274

FOXA1

204

240

rs8050136

53,816,274

GATA3

231

296

rs7202116

53,821,614

FOS

299

275

rs7202116

53,821,614

MAFK

1000

290

rs7202116

53,821,614

MAFF

852

280

rs17817964

53,828,065

GATA3

213

296

  1. Score varies from 1 to 1000
  2. Highly scored TFs are marked with bold