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Table 3 List of individual somatic variant callers embedded in NeoMutate

From: NeoMutate: an ensemble machine learning framework for the prediction of somatic mutations in cancer

Tool Version Methodology
MuTect2 3.8 Bayesian classifier
Strelka2 2.8.4 Bayesian model of admixture
VarScan2 2.4.3 Heuristic methodology with statistical test
VarDict 1.4 Combined heuristic and statistical algorithm
SomaticSniper 1.0.5.0 Bayesian approach for estimating genotype probabilities
Freebayes 0.1.2 Bayesian model with error probabilities
Lancet 1.0.5 Colored de Bruijn graphs