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Table 1 Comparison of the features of similar tools for CoMut-like plot generation

From: CoMutPlotter: a web tool for visual summary of mutations in cancer cohorts

Software

CoMutPlotter

iCoMuta

cBioPortalb

GenVisRc

maftoolsd

Usage

Web

Web

Web

Command

Command

Supported file format

MAF

TSV

VCF

TCGA data

TCGA/ICGC

data

MAF

TSV

MAF

Significantly mutated gene identification

✓

✓

✗

✗

✗

Cross-project comparison

✓

✗

✗

✗

✗

Mutational signature analysis

✓

✗

✗

✗

✓

  1. a http://firebrowse.org/iCoMut/
  2. b http://www.cbioportal.org
  3. c https://bioconductor.org/packages/release/bioc/html/GenVisR.html
  4. d https://bioconductor.org/packages/release/bioc/html/maftools.html