From: Targeted next generation sequencing as a tool for precision medicine
Subject ID | CYP2D6 copy number detection | CYP2D6 genotype | Phenotype prediction | ||||
---|---|---|---|---|---|---|---|
NGS | TaqMana | ||||||
Coverage ratio | Z-score | Gene copy number | Ratio | Gene copy number | |||
PGAR844 | 0.55 | −3.16 | 1 | 0.44 | 1 | *1/*5 | IM |
PGAR867 | 0.51 | −3.36 | 1 | 0.44 | 1 | *1/*5 | IM |
PGON198 | 0.50 | −2.96 | 1 | 0.53 | 1 | *4/*5 | PM |
PGST66 | 0.43 | −3.54 | 1 | 0.45 | 1 | *3/*5 | PM |
PGST140 | 0.48 | −3.39 | 1 | 0.43 | 1 | *1/*5 | IM |
PGST217 | 0.45 | −3.55 | 1 | 0.45 | 1 | *1/*5 | IM |
PGST52 | 0.54 | −2.74 | 1 | 0.45 | 1 | *1/*5 | IM |
PGAR1070 | 0.47 | −3.33 | 1 | 0.48 | 1 | *4/*5 | PM |
PGAR1132 | 0.46 | −3.79 | 1 | 0.49 | 1 | *4/*5 | PM |
PGAR1622 | 1.44 | 3.59 | > 2 | 1.40 | > 2 | *1/*1 | UM |
PGON142 | 1.30 | 3.20 | > 2 | 1.48 | > 2 | *1/*1 | UM |
PGON287 | 1.62 | 4.04 | > 2 | 1.90 | > 2 | *41/*4 | IM |
PGST38 | 1.32 | 1.91 | > 2 | 1.38 | > 2 | *1/*4 | IM |
PGON194 | 1.29 | 2.25 | > 2 | 1.98 | > 2 | *1/*4 | IM |
PGST223 | 1.60 | 3.25 | > 2 | 1.86 | > 2 | *1/*1 | UM |