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Table 1 Prevalence (proportion) of LGL patients and individuals from the five super-populations represented in the KGP data carrying a polymorphic HERV-K provirus

From: Retrovirus insertion site analysis of LGL leukemia patient genomes

HERV-K (hg19 coordinate) LGL ELGL KGP AFR AMR EAS EUR SAS
chr1:75842771–75,849,143 70.6 70.0 42.9 26.8 56.5 6.0 68.9 66.8
chr3:148281477–148,285,396 49.0 52.5 41.9 38.9 42.6 45.0 46.5 37.4
chr12: 58721242–58,730,698 94.1 97.5 70.7 58.9 78.4 60.0 87.3 75.5
chr19: 21841536–21,841,542 5.9 7.5 27.0 39.2 11.9 32.2 10.7 32.4
chr19:22414379–22,414,380 51.0 47.5 67.8 89.2 60.8 56.9 55.8 67.2
  1. AFR African, AMR Admixed American, EAS East Asian, EUR European, SAS South Asian, LGL All LGL patients in this study (51 total), ELGL T-LGL patients with European ancestry (T-LGL-EUR, 40 total)