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Table 2 DMG on X chromosome

From: Whole-genome bisulfite sequencing in systemic sclerosis provides novel targets to understand disease pathogenesis

Gene Coordinates of DMR (GRCh37) FDR Averaged difference Annotation
FTSJ1 [48,334,723, 48,334,739] 0.014 −0.23 5’UTR; Exon
MIR4770 [6,303,169, 6,303,169] § 0.015 −0.37 Upstream 1-5 kb
PQBP1 [48,755,311, 48,755,329] 0.016 0.23 Promoter; 5’UTR; Exon; Intron
FIRRE [130,880,912, 130,880,927] 0.021 −0.25 Intron
PCDH19 [99,663,316, 99,663,316] § 0.027 −0.34 Exon
MECP2 [153,362,114, 153,362,135] 0.027 0.23 Intron
MIR363 [133,306,880, 133,306,910] 0.028 0.23 Upstream 1-5 kb
H2BFWT [103,267,866, 103,267,866] § 0.029 0.34 Exon
TIMM8A [100,603,892, 100,603,909] 0.030 0.23 5’UTR; Exon; Intron-Exon Boundary
HTR2C [113,818,760, 113,818,778] 0.035 0.21 5’UTR; Exon
TENM1 [123,994,369, 123,994,369] § 0.044 −0.32 Intron
DCAF12L2 [125,300,434, 125,300,434] § 0.046 −0.32 Promoter
  1. Negative value indicates hypomethylation in SSc
  2. § Single-dinucleotide DMRs were labelled by coordinates of the first C/G sites