Fig. 9From: Parameter, noise, and tree topology effects in tumor phylogeny inferenceEffect of partial transitive reduction on topological features of \(\mathcal {T}(G_{F})\). PTR disproportionately removes wide trees, causing the mean leaf count to decrease with more extreme pruning. The effect on tree height is less clear, although 2-PTR clearly removes shallow trees. The dashed line shows the mean value for underlying treesBack to article page