Skip to main content

Table 1 Dataset Summary

From: Parameter, noise, and tree topology effects in tumor phylogeny inference

PatientSamplesMutationsClones\(|\mathcal {T}(G_{F})|\)
CLL003 (D)515/2040
CLL003 (W)513/3040
CLL006 (D)55/1052
CLL006 (W)56/1650
CLL077 (D)512/1641
CLL077 (W)516/2040
EV003833/4980
EV005758/7580
EV006957/7270
EV007848/60100
RK261158/62120
RMH002544/5180
RMH008869/77100
  1. Mutation counts are displayed after/before filtering out mutations with VAF above 0.5. Mutations in CLL patients were clustered by VAF using k-means to identify clones, while we used clusters from [19] for the ccRCC patients. (D) indicates deep sequencing data and (W) indicates WGS data