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Table 1 Dataset Summary

From: Parameter, noise, and tree topology effects in tumor phylogeny inference

Patient

Samples

Mutations

Clones

\(|\mathcal {T}(G_{F})|\)

CLL003 (D)

5

15/20

4

0

CLL003 (W)

5

13/30

4

0

CLL006 (D)

5

5/10

5

2

CLL006 (W)

5

6/16

5

0

CLL077 (D)

5

12/16

4

1

CLL077 (W)

5

16/20

4

0

EV003

8

33/49

8

0

EV005

7

58/75

8

0

EV006

9

57/72

7

0

EV007

8

48/60

10

0

RK26

11

58/62

12

0

RMH002

5

44/51

8

0

RMH008

8

69/77

10

0

  1. Mutation counts are displayed after/before filtering out mutations with VAF above 0.5. Mutations in CLL patients were clustered by VAF using k-means to identify clones, while we used clusters from [19] for the ccRCC patients. (D) indicates deep sequencing data and (W) indicates WGS data