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Table 4 Reassortment patterns on host distribution of selected avian (0), human (1) and swine (2) strains and the gap ’-’ denoted the missing sequence in the genome

From: HopPER: an adaptive model for probability estimation of influenza reassortment through host prediction

 StrainSubtypeHAM2NANPNS1PAPB1PB2REprob
AvianA/domestic teal/Hunan/79/2005H5N1000000000.701
 A/pekin duck/California/P30/2006H4N2000002000.856
 A/mallard/Pennsylvania/454069-12/2006H5N4001000000.804
 A/chicken/Hubei/C1/2007H9N2020022000.976
HumanA/California/05/2009H1N11111-1110.888
 A/Texas/05/2009H1N1122111110.993
 A/California/04/2009H1N1121111110.885
 A/New Jersey/1976H1N1201111110.984
SwineA/Thailand/271/2005H1N11-1022220.995
 A/swine/Ontario/00130/97H3N2211221121
 A/swine/Ontario/53518/03H1N1222222120.959
 A/swine/Hong Kong/273/1994H1N1121122120.999