Table 3 Correlation of C-score and factor activities per sample shown in Fig. 2
From: Fusion transcript detection using spatial transcriptomics
Sample | Factor | Sample-wide | ||||
|---|---|---|---|---|---|---|
# spots | Correlation ρ Spearman | Correlation ρ Pearson | p-value for ρ Spearman | p-value for ρ Pearson | ||
Sample 2.4 | Normal glands | 451 | −0.10 | − 0.13 | 4.19E-02 | 6.20E-03 |
Sample 2.4 | PIN glands | 451 | 0.14 | 0.02 | 3.15E-03 | 6.21E-01 |
Sample 2.4 | Cancer | 452 | 0.26 | 0.25 | 3.74E-08 | 1.07E-07 |
Sample 3.3 | Normal glands | 500 | −0.02 | −0.04 | 6.51E-01 | 3.53E-01 |
Sample 3.3 | PIN glands | 500 | −0.03 | 0.00 | 4.91E-01 | 9.59E-01 |
Sample 3.3 | Cancer | 500 | 0.20 | 0.14 | 4.16E-06 | 1.55E-03 |
Sample 3.2 | Inflammation | 560 | 0.17 | 0.11 | 1.32E-04 | 1.50E-02 |
Sample 3.2 | Normal & PIN glands | 560 | −0.17 | −0.04 | 8.28E-05 | 3.86E-01 |
Sample 3.2 | Cancer | 560 | 0.16 | 0.12 | 2.61E-04 | 4.32E-03 |