From: Comparative analysis of somatic variant calling on matched FF and FFPE WGS samples
Strelka2 | Shimmer |
Somatic EVS from 5 to 20 (steps of 0.25) | Q-value from 0.0005 to 0.05 (steps of 0.0005) |
Mutect2 | VarScan2 |
TLOD from 0 to 200 (steps of 1) | Somatic p-value from 0.00005 to 0.01 (steps of 0.00005) |