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Table 1 Region of interests of custom panel

From: Next-generation sequencing analysis of endometrial screening liquid-based cytology specimens: a comparative study to tissue specimens

60 genes 17 MSI regions
Target Loci Gene
AKT1 CTNNB1 MAP2K1 PIK3CA Bat-25 chr4:55598208–55,598,241 KIT
APC DDR2 MAP2K2 PIK3R1 Bat-26 chr2:47641403–47,641,591 MSH2
ATM EGFR MAP2K4 PMS2 MONO-27 chr2:39564890–39,564,926 MAP4K3
AR ERBB2 MED12 PTEN NR-21 chr14:23652343–23,652,372 SLC7A8
ARID1A ERBB3 MET RB1 NR-24 chr2:95849358–95,849,389 ZNF2
BARD1 ERBB4 MDM2 RAD51 MSI-1 chr1:201754407–201,754,432 NAV1
BRAF ESR1 MLH1 STK11 MSI-3 chr2:62063090–62,063,115 FAN161A
BRCA1 FGFR1 MSH2 TP53 MSI-4 chr2:108479619–108,479,675 RGPD4
BRCA2 FGFR2 MSH6 RET MSI-6 chr5:172421757–172,421,780 ATP6V0E1
BRIP1 FGFR3 MTOR   MSI-7 chr6:142691947–142,691,972 GPR126
CCND1 FLT3 MUTYH   MSI-8 chr7:1787516–1,787,541 ELFN1
CD274 HRAS MYC   MSI-11 chr11:106695511–106,695,531 GUCY1A2
CDK4 IDH1 NF1   HSPH1-T17 chr13:31722617–31,722,642 HSPH1
CDK6 IDH2 NRAS   MSI-12 chr15:45897768–45,897,790 BLOC1S6
CDKN2A KDR PALB2   MSI-13 chr16:18882656–18,882,679 SMG1
CDH1 KIT PDCD1   MSI-14 chr17:19314914–19,314,940 RNF112
CTLA4 KRAS PDGFRA   EWSR1 chr22:29696465–29,696,489 EWSR1