High dimensional model representation of log likelihood ratio: binary classification with SNP data

BMC Medical Genomics

Table 1 Several top SNPs and their associated risk for the HAPGEN2 project

Rank	SNP id	Chromosome	Location	Risk	+/− Risk	Recessive
1	rs1982151	9	85807085	5.38	-	TRUE
2	rs796004	9	85784618	5.38	+	FALSE
3	rs296887	9	85784890	5.38	+	FALSE
4	rs296889	9	85785391	5.38	+	FALSE
5	rs296890	9	85785551	5.38	+	FALSE
6	rs796003	9	85785621	5.38	+	FALSE
7	rs296893	9	85788010	5.38	+	FALSE
8	rs11140325	9	85824855	5.38	-	TRUE
9	rs10868080	9	85816589	5.38	-	TRUE
10	rs296888	9	85785318	5.34	+	TRUE
40	rs861539	14	103235506	4.4	-	FALSE
41	rs861534	14	103238454	4.4	-	TRUE
42	rs861531	14	103242560	4.4	-	FALSE
43	rs8018979	14	103178840	4.39	-	FALSE
44	rs11849259	14	103186074	4.39	-	FALSE
45	rs3783404	14	103188251	4.39	-	FALSE
46	rs55885592	14	103195777	4.39	-	FALSE
47	rs56660916	14	103195890	4.39	-	FALSE
48	rs57218990	14	103197760	4.39	-	FALSE
49	rs2403205	14	103213138	4.39	-	FALSE
50	rs709400	14	103219228	4.39	-	FALSE

ISSN: 1755-8794