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Table 2 Top ten gene pairs to distinguish between breast cancer and normal mammary tissue

From: Considerations for feature selection using gene pairs and applications in large-scale dataset integration, novel oncogene discovery, and interpretable cancer screening

Method

Gene 1

Gene 2

Score

TSP

FAT4

LRRC42

0.8391

BTBD7

LRRC42

0.8381

C11orf63

LRRC42

0.8344

BSDC1

DENND3

0.8297

BSDC1

BTBD7

0.8277

CDR2L

FAT4

0.8266

PLEKHA6

SPATA6

0.8241

LRRC42

ZHX3

0.8239

LRRC42

TEK

0.8228

BSDC1

GRK5

0.8219

AM

ATP6V1B2

SCARF1

3948.5

BSDC1

NRG2

3837.0

PMPCA

SCARF1

3722.0

ARHGEF5

BSDC1

3713.3

ATP6V1H

NRG2

3708.5

BSDC1

CSAD

3684.3

ATP6V1B2

NRG2

3666.0

FAF1

SCARF1

3642.3

ERGIC2

SCARF1

3638.0

BSDC1

SEMA3G

3613.8

AA

MEOX2

BSDC1

3127.9

NRG2

BSDC1

3088.2

SCARF1

BSDC1

3045.9

MEOX1

BSDC1

3039.5

GPRASP1

BSDC1

3019.9

PPP1R1A

BSDC1

2980.3

SEMA3G

BSDC1

2950.1

CSAD

BSDC1

2930.1

BSDC1

ARHGEF15

2926.7

GNAZ

BSDC1

2882.6

FM

SOCS5

BSDC1

1.2573

NRG2

BSDC1

1.0630

SOCS5

LRRC42

1.0207

NRG2

LRRC42

1.0186

SEMA3G

BSDC1

1.0146

RBM19

BSDC1

1.0085

TBC1D22A

BSDC1

1.0067

DYRK3

BSDC1

0.9893

SEMA3G

LRRC42

0.9783

NRG2

CDR2L

0.9721

TBC1D22A

LRRC42

0.9663

FA

BSDC1

MEOX2

0.7516

MEOX2

PLEKHA6

0.7231

CDR2L

NRG2

0.6988

LRRC42

MEOX2

0.6822

BSDC1

SOCS5

0.6820

BSDC1

NRG2

0.6729

BSDC1

SEMA3G

0.6632

LRRC42

NRG2

0.6557

BSDC1

GJA4

0.6537

NRG2

PLEKHA6

0.6530