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Table 1 Genetic alterations detected in the patient’s plasma and tumor biopsy specimens

From: A novel somatic BRCA2 point mutation in a metastatic pancreatic cancer patient: a case report

Genes

Alternations

Nucleotide change

MAF (plasma)

MAF (tumor)

BRCA2

p. I2315T

c.6944T > C

28%

39.5%

KRAS

p. Q61R

c.182A > G

27.4%

43.2%

TP53

p. R110del

c.329_331delGTC

37.4%

81.6%

APC

p. S1465RfsX9

c.4393_4394dupAG

26.7%

71.7%

CCNE1

Gene amplification

NA

16.0-fold

27.4-fold

CCNE1

IGR (downstream UQCRFS1) ~ CCNE1 fusion

NA

0.1%

PIK3CA

Gene amplification

NA

1.9-fold

PKHD1

p. R909X truncation

c.2725C > T

4.9%

16.9%

SOX2

Gene amplification

NA

2.0-fold

STMN1

Gene amplification

NA

1.8-fold

TERC

Gene amplification

NA

1.9-fold

TUBB3

Gene amplification

NA

2.2-fold

  1. –, not detectable; NA, not applicable; MAF, mutant allele frequency. Gene amplification was presented as the relative fold change to normal controls