Dataset | Abbreviation in a text | Number of samples | Platform | Reference | |
---|---|---|---|---|---|
Cancer | Normal | ||||
GSE26126 (DNA methylation) | Absher | 95 | 86 | Illumina Human Methylation 27 BeadChip array (27 k) | [22] |
GSE76938 (DNA methylation) | Kirby | 73 | 63 | Illumina Infinium Human Methylation 450 BeadChip array (HM450) | [19] |
The Cancer Genome Atlas (TCGA) (DNA methylation) | TCGA | 503 | 50 | Illumina Infinium Human Methylation 450 BeadChip array (HM450) | [34] |
Meta-analysis gene expression dataset (previously processed data) | Meta expression | 887 | 230 | Various | [35] |
TCGA (gene expression data processed for this publication) | [34] | ||||
TCGA (DNA methylation together with gene expression) | TCGA combined | 497 | 35 | Illumina Infinium Human Methylation 450 BeadChip array (HM450) | [34] |