Table 3 Number of hyper-/hypo- methylated promoter in each cancer
Cancer | Hypermethylated promoter | Hypormethylated promoter | log2 odd ratio | p-value | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | 0.05 | 0.075 | 0.1 | 0.05 | 0.075 | 0.1 | 0.05 | 0.075 | 0.1 | 0.05 | 0.075 | 0.1 |
COAD | 2,923 | 921 | 246 | 348 | 41 | 3 | 3.0702 | 4.4895 | 6.3575 | 0 | 1.15E-201 | 1.E-67 |
UCEC | 2,886 | 1,329 | 565 | 1,343 | 441 | 129 | 1.1036 | 1.5914 | 2.1308 | 1.20E-89 | 4.52E-88 | 5.E-62 |
KIRC | 1,747 | 458 | 100 | 1,235 | 226 | 38 | 0.5003 | 1.0190 | 1.3959 | 2.52E-16 | 5.03E-18 | 1.E-07 |
LAML | 407 | 73 | 15 | 3,274 | 1,285 | 446 | -3.0079 | -4.1377 | -4.8940 | 0 | 5.86E-258 | 2.E-107 |
LUSC | 297 | 27 | 1 | 3,882 | 886 | 94 | -3.7082 | -5.0362 | -6.5545 | 0 | 2.33E-208 | 4.E-27 |
HNSC | 63 | 2 | 0 | 2,500 | 284 | 15 | -5.3104 | -7.1497 | -infinity | 0 | 1.95E-80 | 6.E-05 |
BRCA | 310 | 18 | 1 | 1,496 | 201 | 27 | -2.2707 | -3.4811 | -4.7548 | 3.10E-159 | 8.28E-40 | 2.E-07 |
BLCA | 87 | 3 | 0 | 1,031 | 60 | 3 | -3.5668 | -4.3219 | -infinity | 1.21E-187 | 8.09E-15 | 2.E-01 |
LUAD | 183 | 8 | 2 | 521 | 17 | 0 | -1.5094 | -1.0874 | +infinity | 3.97E-36 | 0.107299 | 5.E-01 |